Package: EcoDiet 2.0.1

EcoDiet: Estimating a Diet Matrix from Biotracer and Stomach Content Data

Biotracers and stomach content analyses are combined in a Bayesian hierarchical model to estimate a probabilistic topology matrix (all trophic link probabilities) and a diet matrix (all diet proportions). The package relies on the JAGS software and the 'jagsUI' package to run a Markov chain Monte Carlo approximation of the different variables.

Authors:Pierre-Yves Hernvann [cre, aut], Didier Gascuel [aut], Dorothee Kopp [aut], Marianne Robert [aut], Jerome Guitton [aut], Etienne Rivot [aut], Heloise Thero [aut]

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Peer review:

Bug tracker:https://github.com/pyhernvann/ecodiet/issues

On CRAN:

7 exports 4 stars 1.50 score 61 dependencies 12 scripts 809 downloads

Last updated 6 months agofrom:53249fd293. Checks:OK: 7. Indexed: yes.

Exports:diagnose_modelplot_dataplot_priorplot_resultspreprocess_datarun_modelwrite_model

Dependencies:backportsbitbit64broombroom.helpersclicliprcodacolorspacecpp11crayondplyrfansifarverforcatsgenericsGGallyggmcmcggplot2ggstatsgluegtablehavenhmsisobandjagsUIlabelinglabelledlatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepatchworkpillarpkgconfigplyrprettyunitsprogresspurrrR6RColorBrewerRcppreadrrjagsrlangscalesstringistringrtibbletidyrtidyselecttzdbutf8vctrsviridisLitevroomwithr